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microarray based comparative genome resequencing (cgr)  (NimbleGen Systems GmbH)

 
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    NimbleGen Systems GmbH microarray based comparative genome resequencing (cgr)
    The signal ratios were plotted against each strain. The x-axis represents the <t>microarray</t> data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.
    Microarray Based Comparative Genome Resequencing (Cgr), supplied by NimbleGen Systems GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+based+comparative+genome+resequencing+%28cgr%29/pmc03068143-79-10-6?v=NimbleGen+Systems+GmbH
    Average 90 stars, based on 1 article reviews
    microarray based comparative genome resequencing (cgr) - by Bioz Stars, 2026-07
    90/100 stars

    Images

    1) Product Images from "Identification of Genes and Genomic Islands Correlated with High Pathogenicity in Streptococcus suis Using Whole Genome Tilling Microarrays"

    Article Title: Identification of Genes and Genomic Islands Correlated with High Pathogenicity in Streptococcus suis Using Whole Genome Tilling Microarrays

    Journal: PLoS ONE

    doi: 10.1371/journal.pone.0017987

    The signal ratios were plotted against each strain. The x-axis represents the microarray data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.
    Figure Legend Snippet: The signal ratios were plotted against each strain. The x-axis represents the microarray data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.

    Techniques Used: Microarray, Transformation Assay

    Dendrogram on the left was based on microarray data for the presence and absence of genes using UPGMA while phylogenic tree on the right in mirrored image was based on the concatenated sequences of 7 MLST alleles constructed using the neighbour joining method. The branches showing similar groupings were connected by lines. MLST based tree was rooted using a Streptococcus pneumonia strain marked as SP as an outgroup. Microarray data based tree was unrooted.
    Figure Legend Snippet: Dendrogram on the left was based on microarray data for the presence and absence of genes using UPGMA while phylogenic tree on the right in mirrored image was based on the concatenated sequences of 7 MLST alleles constructed using the neighbour joining method. The branches showing similar groupings were connected by lines. MLST based tree was rooted using a Streptococcus pneumonia strain marked as SP as an outgroup. Microarray data based tree was unrooted.

    Techniques Used: Microarray, Construct



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    microarray based comparative genome resequencing (cgr)  (NimbleGen Systems GmbH)
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    NimbleGen Systems GmbH microarray based comparative genome resequencing (cgr)
    The signal ratios were plotted against each strain. The x-axis represents the <t>microarray</t> data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.
    Microarray Based Comparative Genome Resequencing (Cgr), supplied by NimbleGen Systems GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+based+comparative+genome+resequencing+%28cgr%29/pmc03068143-79-10-6?v=NimbleGen+Systems+GmbH
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    microarray-based comparative whole-genome resequencing cgr  (NimbleGen Systems GmbH)
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    The signal ratios were plotted against each strain. The x-axis represents the <t>microarray</t> data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.
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    NimbleGen Systems GmbH microarray-based comparative whole-genome resequencing (cgr)
    The signal ratios were plotted against each strain. The x-axis represents the <t>microarray</t> data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.
    Microarray Based Comparative Whole Genome Resequencing (Cgr), supplied by NimbleGen Systems GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+based+comparative+genome+resequencing+%28cgr%29/pmc02846718-234-0-5?v=NimbleGen+Systems+GmbH
    Average 90 stars, based on 1 article reviews
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    90/100 stars
    		  Buy from Supplier

    Image Search Results


    The signal ratios were plotted against each strain. The x-axis represents the microarray data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.

    Journal: PLoS ONE

    Article Title: Identification of Genes and Genomic Islands Correlated with High Pathogenicity in Streptococcus suis Using Whole Genome Tilling Microarrays

    doi: 10.1371/journal.pone.0017987

    Figure Lengend Snippet: The signal ratios were plotted against each strain. The x-axis represents the microarray data of individual strains, while the y-axis represents the log 2 transformed feature signal ratio. The box is defined by the lower and upper quartiles, and the line in the center of the box is the median. Whiskers represent the rest of the distribution, with caps at the ends of each box indicating the extreme values (minimum and maximum). The strain name corresponding to each microarray is shown at the bottom of the plot.

    Article Snippet: In this study, we used NimbleGen (NimbleGen Systems, Madison, WI) microarray based comparative genome resequencing (CGR) technology to conduct a comprehensive genomic comparison of 31 S. suis strains of 23 serotypes from different clinical sources using genome sequence of a HP strain, GZ1, as the reference to gain a deeper insight into the species diversity, genome variation and virulence.

    Techniques: Microarray, Transformation Assay

    Dendrogram on the left was based on microarray data for the presence and absence of genes using UPGMA while phylogenic tree on the right in mirrored image was based on the concatenated sequences of 7 MLST alleles constructed using the neighbour joining method. The branches showing similar groupings were connected by lines. MLST based tree was rooted using a Streptococcus pneumonia strain marked as SP as an outgroup. Microarray data based tree was unrooted.

    Journal: PLoS ONE

    Article Title: Identification of Genes and Genomic Islands Correlated with High Pathogenicity in Streptococcus suis Using Whole Genome Tilling Microarrays

    doi: 10.1371/journal.pone.0017987

    Figure Lengend Snippet: Dendrogram on the left was based on microarray data for the presence and absence of genes using UPGMA while phylogenic tree on the right in mirrored image was based on the concatenated sequences of 7 MLST alleles constructed using the neighbour joining method. The branches showing similar groupings were connected by lines. MLST based tree was rooted using a Streptococcus pneumonia strain marked as SP as an outgroup. Microarray data based tree was unrooted.

    Article Snippet: In this study, we used NimbleGen (NimbleGen Systems, Madison, WI) microarray based comparative genome resequencing (CGR) technology to conduct a comprehensive genomic comparison of 31 S. suis strains of 23 serotypes from different clinical sources using genome sequence of a HP strain, GZ1, as the reference to gain a deeper insight into the species diversity, genome variation and virulence.

    Techniques: Microarray, Construct